MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Shigella sonnei Ss046 plasmid pSS046_spB

Total Repeats: 31

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_009346	TA	3	6	1919	1924	50 %	50 %	0 %	0 %	Non-Coding
2	NC_009346	TCT	2	6	2104	2109	0 %	66.67 %	0 %	33.33 %	Non-Coding
3	NC_009346	T	7	7	2118	2124	0 %	100 %	0 %	0 %	Non-Coding
4	NC_009346	CTG	2	6	2136	2141	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
5	NC_009346	A	6	6	2152	2157	100 %	0 %	0 %	0 %	Non-Coding
6	NC_009346	CAG	2	6	2227	2232	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
7	NC_009346	ACT	2	6	2280	2285	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8	NC_009346	CAT	2	6	2313	2318	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
9	NC_009346	GCT	2	6	2344	2349	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
10	NC_009346	TGAG	2	8	2797	2804	25 %	25 %	50 %	0 %	Non-Coding
11	NC_009346	CGC	2	6	2816	2821	0 %	0 %	33.33 %	66.67 %	Non-Coding
12	NC_009346	TGT	2	6	2900	2905	0 %	66.67 %	33.33 %	0 %	Non-Coding
13	NC_009346	TCCTG	2	10	2917	2926	0 %	40 %	20 %	40 %	Non-Coding
14	NC_009346	TCTG	2	8	3143	3150	0 %	50 %	25 %	25 %	Non-Coding
15	NC_009346	TG	3	6	3161	3166	0 %	50 %	50 %	0 %	Non-Coding
16	NC_009346	CCG	2	6	3199	3204	0 %	0 %	33.33 %	66.67 %	Non-Coding
17	NC_009346	A	6	6	3262	3267	100 %	0 %	0 %	0 %	Non-Coding
18	NC_009346	GACAG	2	10	3301	3310	40 %	0 %	40 %	20 %	Non-Coding
19	NC_009346	GA	3	6	3740	3745	50 %	0 %	50 %	0 %	Non-Coding
20	NC_009346	AG	3	6	3822	3827	50 %	0 %	50 %	0 %	Non-Coding
21	NC_009346	TCCT	2	8	3848	3855	0 %	50 %	0 %	50 %	Non-Coding
22	NC_009346	GTG	2	6	3921	3926	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_009346	TATT	2	8	4398	4405	25 %	75 %	0 %	0 %	Non-Coding
24	NC_009346	TTA	2	6	4415	4420	33.33 %	66.67 %	0 %	0 %	Non-Coding
25	NC_009346	TTATC	2	10	4429	4438	20 %	60 %	0 %	20 %	Non-Coding
26	NC_009346	TCTCA	2	10	4900	4909	20 %	40 %	0 %	40 %	Non-Coding
27	NC_009346	GTG	2	6	4988	4993	0 %	33.33 %	66.67 %	0 %	Non-Coding
28	NC_009346	T	7	7	5004	5010	0 %	100 %	0 %	0 %	Non-Coding
29	NC_009346	GCG	2	6	5060	5065	0 %	0 %	66.67 %	33.33 %	Non-Coding
30	NC_009346	TA	3	6	5079	5084	50 %	50 %	0 %	0 %	Non-Coding
31	NC_009346	TA	4	8	5096	5103	50 %	50 %	0 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.